Software and algorithmic aspects of the real-time bioelectronic systems for heart rhythm analysis in exoskeleton invertebrates applied to the surface water quality assessment

A.S. Kurakin1, S.V. Kholodkevich1,2, A.V. Ivanov2

1St. Petersburg Scientific Research Center for Ecological Safety (SRCES RAS), Russian Federation, St. Petersburg, Korpusnaya St., 18

2Saint Petersburg University, Russian Federation, St. Petersburg, Universitetskaya Emb., 7/9

E-mail: kholodkevich@mail.ru

DOI: 10.33075/2220-5861-2017-4-38-47

UDC 504.064.36

Abstract:

   The paper is devoted to the development and approbation of the original algorithmic software applied to the bioelectronic system for surface water quality assessment. The characteristics of the heart rate variability for bioindicators are considered for use in real time analysis. Special attention is paid to the description of the optimization algorithm for parameters of the digital filter in the VarPulse software.

Keywords: bioelectronic system, heart rhythm variability, digital filter, optimization, VarPulse software.

Full text in PDF (RUS)

LIST OF REFERENCES

  1. Jekspress-metod ocenki funkcional’nogo sostojanija rechnyh rakov kak instrument testirovanija ustojchivosti jekosistem malyh vodoemov. S.V. Holodkevich, T.E. Shumilova, V.P. Fedotov [i dr.]. Novoe v jekologii i bezopasnosti zhiznedejatel’nosti: trudy IV Vseros. nauch.-prakt. konf. s mezhdunar. uchastiem (SPb., 16–18 ijunja 1999 g.). SPb., 1999. Vol. 3. 451 p.
  2. Depledge M.H., Aagaard A., Gyorkos P. Assessment of trace metal toxicity using molecular, physiological and behavioral biomarkers. Marine Pollution Bulletin. 1995. Vol. 31, No 1–3. pp. 19–27.
  3. Holodkevich S.V. Biojelektronnyj monitoring urovnja toksichnosti prirodnyh i stochnyh vod v real’nom vremeni. Jekologicheskaja himija. 2007. Vol. 16. No 4. pp. 223–232.
  4. Fedotov V.P., Holodkevich S.V., Strochilo A.G. Izuchenie sokratitel’noj aktivnosti serdca rakov s pomoshh’ju novogo neinvazivnogo metoda. Zhurnal jevoljucii biohimii i fiziologii. 2000. Vol. 36. No 3. pp. 219–222.
  5. Sistema obespechenija bezopasnosti vodosnabzhenija na vodoprovodnyh stancijah Sankt-Peterburga. P.P. Mahnev, A.V. Bekrenev, V.S. Baklanov [i dr.] Vodosnabzhenie i sanitarnaja tehnika. 2006. No 9. Ch. 1. pp. 6–15.
  6. Real time biomonitoring of surface water toxicity level at water supply stations. S.V. Kholodkevich, A.V. Ivanov, A.S. Kurakin [et al.] Journal of Environmental Bioindicators, 2008. Vol. 3. No 1. pp. 23–34.
  7. Biojelektronnaja sistema s metrologicheskim samokontrolem dlja diagnostiki ostroj toksichnosti vody. V.A. Ljubimcev, S.V. Holodkevich, I.I. Druzhinin [i dr.] Pribory. 2017. No 10 (208). pp. 34–39.
  8. Baevskij R.M., Berseneva A.P. Ocenka adaptacionnyh vozmozhnostej organizma i risk razvitija zabolevanij. Moskwa: «Medicina», 1997. 235 p.
  9. Experiences on ecological status assessment of the Gulf of Bothnia different sites based on cardiac activity biomarkers of caged mussels (Mytilus edulis) S.V. Kholodkevich, T.V. Kuznetsova, K.K. Lehtonen [et al.] ICES Annual Science Conference 2011, 19–23 September, Gdansk, Poland. http: www.ices.dk/products/CMdocs/ CM2011/R/R2011.pdf, 12 p.
  10. Mudrov A.E. Chislennye metody dlja PJeVM na jazykah Bejsik, Fortran i Paskal’. Tomsk: MP “RASKO”, 1991. 272 p.
  11. Venter G. Review of Optimization Techniques. In: Encyclopedia of Aerospace Engineering. John Wiley & Sons. Ltd. – 2010. 12 p.
  12. Jamil M. & Yang X.-S. A literature survey of benchmark functions for global optimization problems. International Journal of Mathematical Modeling and Numerical Optimization. 2013. 4 (2). pp. 150–194.
  13. Ocenka jekologicheskogo sostojanija akvatorij Baltijskogo morja. A.S. Kurakin, S.V. Holodkevich, S. Purvinja [i dr.] Nauchno-tehnicheskie vedomosti SPbGPU. Serija: Nauka i obrazovanie. 2012. No 1 (142). pp. 267–272.

Loading